Wholesome Gluten-Free Applesauce Muffins

Discover the ultimate easy gluten-free applesauce muffins recipe! Crafted from simple ingredients and infused with an abundance of warm spices, these muffins boast a soft, incredibly fluffy texture that will have you coming back for more. Perfect for any time of year, especially cozy autumn mornings.

Delicious gluten-free apple muffins topped with a sweet cinnamon-sugar mixture, ready for a cozy breakfast.

Irresistibly Fluffy Gluten-Free Applesauce Muffins

There’s nothing quite like waking up to the aroma of freshly baked muffins on a lazy weekend morning. Whether your preference leans towards the burst of berries in Gluten-Free Blueberry Muffins, the classic comfort of Bakery-Style Chocolate Chip Muffins, or the delightful crumble of Banana Crumb Muffins, muffins are a beloved treat. And as the weather cools, signaling the arrival of fall, our cravings naturally shift towards seasonal flavors. That’s why a batch of warm, fragrant gluten-free apple spice muffins becomes an absolute must-have.

This particular recipe for Gluten-Free Applesauce Muffins is designed to deliver an incredibly fluffy texture, enriched with a generous blend of warm spices that will make your entire home smell utterly inviting. These aren’t just a delicious fall breakfast option; they also make a delightful addition to school lunches, a comforting after-school snack, or even a festive holiday brunch. They are truly versatile!

If you’re new to baking with applesauce, prepare to be amazed! Applesauce is a fantastic, versatile ingredient commonly used in baking as a substitute for eggs, or to replace butter and other fats. Its natural pectin and moisture content give baked goods an exceptionally moist and tender crumb. In this applesauce muffin recipe, we harness these qualities to create muffins that are not only moist but also wonderfully soft and light – a true triumph in gluten-free baking.

The beauty of these gluten-free apple cinnamon muffins lies in their simplicity. The ingredients list is straightforward, with unsweetened applesauce taking center stage. You’ll find everything you need to bake these delightful muffins right in your pantry or at your local grocery store. Let’s gather our ingredients and dive into creating these heartwarming treats.

A flat lay image showcasing all the simple ingredients required to bake gluten-free applesauce muffins.

Gather Your Simple Ingredients for Amazing Gluten-Free Applesauce Muffins

Creating these delightful gluten-free apple cinnamon muffins starts with a selection of readily available ingredients. Each component plays a crucial role in achieving that perfect fluffy texture and heartwarming flavor. Here’s a detailed look at what you’ll need:

  • Gluten-Free Flour Blend: For ease and consistent results, we recommend a measure-for-measure gluten-free flour blend that already contains xanthan gum. This is vital for providing structure and elasticity often missing in gluten-free baking. Our top recommendation is King Arthur Baking’s gluten-free blend, which we trust for all our muffins, cookies, and brownies. If you opt for another brand, like Bob’s Red Mill, ensure it explicitly states “with xanthan gum” in the ingredients. We do not advise substituting with single-ingredient flours such as oat flour, almond flour, or coconut flour, as they have different absorption properties and will significantly alter the final texture.
  • Baking Soda & Salt: These leavening agents are essential for giving your muffins their characteristic rise and light texture. The salt, though a small amount, is crucial for balancing the sweetness and enhancing all the other flavors.
  • Warm Spices: The heart of these apple spice muffins lies in their aromatic blend. We adore the combination of ground cinnamon, nutmeg, and cloves. This trio creates a cozy, inviting flavor profile that perfectly complements the apples. Feel free to adjust to your personal preference, but this blend is truly SO GOOD!
  • Neutral Oil: A mild-flavored oil such as avocado, canola, or vegetable oil is best here. It adds moisture without imparting a strong flavor that could compete with the apples and spices. We advise against using coconut oil as its distinct taste can overshadow the delicate apple flavors.
  • White Sugar & Brown Sugar: This combination is key! Granulated white sugar provides sweetness and contributes to a tender crumb, while light brown sugar adds a deeper, molasses-rich flavor and extra moisture, making these muffins wonderfully soft.
  • Unsweetened Applesauce: The star ingredient! Much like mashed bananas or pumpkin puree, applesauce is a fantastic natural moisturizer. It keeps these muffins incredibly moist, tender, and contributes a subtle, natural sweetness, making them fluffy and delightful.
  • Eggs: Large eggs act as a binder, helping to hold the muffin batter together, and contributing to the overall structure and rise of the muffins. They provide essential emulsification, ensuring a smooth, cohesive batter.
  • Optional: Fresh Grated Apple: For an extra burst of fresh apple flavor and a touch of delightful texture, consider folding in a cup of peeled, grated green apple. Varieties like Granny Smith work wonderfully, adding a pleasant tartness that brightens the muffins.
  • Our Signature Cinnamon Sugar Topping: Elevate these gluten-free apple muffins with this simple yet irresistible topping! A blend of melted butter, cinnamon, sugar, and a small amount of gluten-free flour creates a delectable crumbly topping. The addition of flour helps the cinnamon-sugar mixture adhere beautifully and stand out on top, giving them a professional, bakery-style finish.
Three perfectly baked gluten-free applesauce muffins displayed on a pristine white background.

Enhance Your Muffins: Creative Optional Extras

These simple gluten-free applesauce muffins are wonderful on their own, designed to be an easy, no-fuss recipe you can whip up for any occasion, from a casual weekend breakfast to a special holiday gathering. However, if you’re feeling adventurous, there are plenty of ways to get creative and customize them! The golden rule for mix-ins is to avoid adding extra moisture, as this can alter the delicate balance of the batter. Stick to dry mix-ins and extras to maintain that perfect soft and fluffy texture. Here are a few delightful options to consider:

  • Simple Cinnamon-Sugar Sprinkle: For a quick, elegant, and utterly delicious touch that gives them a true bakery-style appeal, sprinkle the tops of your applesauce muffins with a simple cinnamon-sugar mixture before baking. We recommend a ratio of 1 teaspoon of ground cinnamon to 1/4 cup of granulated sugar. This simple addition beautifully enhances the apple cinnamon muffins’ flavor, creating a delightful sugary crust.
  • Luxurious Streusel Topping: If you want to go all out and add an extra layer of texture and flavor, prepare a batch of the irresistible streusel topping from our Gluten-Free Banana Crumb Muffins. Sprinkle this generous crumb topping over the muffin batter before they head into the oven. It adds a wonderful buttery, crunchy contrast to the soft muffin.
  • Hearty Chopped Nuts: For a satisfying crunch and nutty flavor, toasted pecans or walnuts are a fantastic addition. You can gently fold about 1/2 to 1 cup of finely chopped toasted nuts into the batter with the grated apple, or sprinkle them on top with the cinnamon-sugar mixture. Toasting the nuts beforehand brings out their deep, earthy flavors even more.
  • Dried Fruits: Small amounts of dried cranberries, raisins, or chopped dried apricots can add a chewy texture and concentrated sweetness. Make sure they are finely chopped and tossed with a tiny bit of flour to prevent them from sinking to the bottom of the muffins.
  • White Chocolate Chips: A sprinkle of white chocolate chips can add a creamy sweetness that pairs beautifully with the apple and cinnamon flavors, creating a more decadent treat.

Baking Perfect Muffins with Applesauce: Your Step-by-Step Guide

For the complete recipe, including precise ingredient amounts, detailed instructions, and handy tips, please refer to the recipe card conveniently located below.

A step-by-step photo showing the mixing of dry ingredients for gluten-free applesauce muffins.

Making these gluten-free applesauce muffins is a straightforward process, even for novice bakers. Follow these steps carefully for the best results:

  1. Preheat Oven & Prepare Muffin Tin: Begin by preheating your oven to a robust 400 degrees Fahrenheit (200°C). This initial high temperature is key to achieving a beautiful domed top on your muffins. While the oven preheats, prepare a 12-cup metal muffin tin. Line each cup with parchment liners for easy removal and minimal cleanup, or grease them thoroughly with butter or non-stick spray.
  2. Combine the Dry Ingredients: In a medium-sized mixing bowl, whisk together your gluten-free flour blend, baking soda, salt, ground cinnamon, nutmeg, and cloves. Whisking ensures that the leavening agents and spices are evenly distributed throughout the flour, which is crucial for uniform rise and flavor.
  3. Mix the Wet Ingredients: In a separate, larger mixing bowl, combine the granulated white sugar, light brown sugar, and a neutral oil (like canola or avocado oil). Whisk these together until they are well combined and smooth. Next, incorporate the unsweetened applesauce, mixing until fully integrated. Finally, add the large eggs one at a time, whisking well after each addition until just combined. Overmixing at this stage can lead to tougher muffins.
  4. Gently Combine Wet and Dry: Pour the dry ingredient mixture into the wet ingredients. Using a spatula or wooden spoon, gently fold them together until just combined. The batter should still have a few streaks of flour; avoid overmixing. Overmixing gluten-free flour can lead to dense, gummy muffins. If you’re adding optional grated apple or chopped nuts, fold them in at this stage, being careful not to overmix.
  5. Let the Batter Rest – The Secret to Tall Muffins!: This step is crucial for achieving that coveted bakery-style muffin top. Cover the bowl and let the batter rest at room temperature for 30 to 60 minutes. This resting period allows the gluten-free flour to fully hydrate, resulting in a significantly better rise and a softer, fluffier texture. It’s truly worth the wait!
A step-by-step photo showing the finished batter being scooped into muffin liners for gluten-free apple muffins.
  1. Prepare the Cinnamon-Sugar Topping: While the batter rests, prepare your delicious topping. In a small bowl, combine the melted butter, ground cinnamon, granulated sugar, and a couple of tablespoons of gluten-free measure-for-measure flour. Stir everything together with a fork until the ingredients are well combined and the butter evenly coats all the dry crumbs. The mixture will have a thick, powdery, crumbly consistency.
  2. Scoop and Top the Muffins: After the batter has rested, gently use an ice cream scoop (a 1/4-cup size works perfectly) to spoon the batter into each prepared muffin cup. Fill each cup almost to the top of the parchment liner. Be as gentle as possible during this step to avoid deflating the batter, which could impact the muffins’ rise. Depending on how much the batter expanded during resting, you might have enough for one or two extra muffins, which can be baked in a second batch. Once scooped, generously sprinkle the tops of the muffins with your prepared cinnamon-sugar mixture.
  3. Bake and Cool to Perfection: Place the muffin tin into the preheated 400°F (200°C) oven and bake for 5 minutes. This initial high heat creates an immediate burst of steam, helping the muffins rise rapidly and form those beautiful domed tops. After 5 minutes, reduce the oven temperature to 350°F (175°C) and continue baking for another 10-14 minutes, or until the muffins are fully cooked. You’ll know they’re done when the internal temperature reaches at least 205°F (96°C), the tops spring back gently when pressed, and a toothpick inserted into the center comes out with only a few moist crumbs attached. Allow the muffins to cool in the pan for 1-2 minutes before carefully transferring them to a wire cooling rack to cool completely.
  4. Serve and Store for Freshness: These gluten-free applesauce muffins are absolutely divine when enjoyed warm, fresh from the oven. For any leftover muffins, store them in an airtight container at room temperature for up to 2 days to maintain their freshness and soft texture. For longer storage, place them in a freezer-safe bag and freeze for up to 2 months. Thaw at room temperature or gently warm in the microwave or oven for a quick treat.
Two perfectly golden gluten-free apple muffins stacked on a white plate, showcasing their soft texture.

FAQ & Pro Tips for the Best Gluten-Free Applesauce Muffins

Achieving bakery-quality gluten-free applesauce muffins is easier than you think with a few helpful tips and tricks. Here are answers to common questions and insights to ensure your muffins are always perfect:

The Right Tools Make a Difference!

While you don’t need a professional kitchen setup, having the right tools can significantly enhance your baking experience and results. We highly recommend:

  • Light-Colored Metal Muffin Pan: A light-colored metal pan promotes even baking and prevents the bottoms and edges of your muffins from becoming too dark or overcooked, especially important with recipes that contain natural sugars like applesauce.
  • Parchment Liners: These are a game-changer! Parchment liners ensure your apple muffins release effortlessly from the pan, preventing any sticking and ensuring you don’t lose precious bits of muffin to the liner.
  • 1/4 Cup Ice Cream Scoop: This simple tool makes portioning the batter quick, easy, and consistent. Uniformly sized muffins bake more evenly and look professional. (We also use this size for some of our favorite big cookie recipes!).

Applesauce Wisdom for Perfect Muffins.

The quality and type of applesauce you use can impact your muffins:

  • Favorite Brands: Our easy recipe has been tested with several brands of store-bought unsweetened applesauce, and popular options like Motts work consistently well and are widely available.
  • Avoid Flavored Applesauce: Steer clear of applesauce varieties with added flavors (like cinnamon or berry). These can clash with the warm spices already in our recipe, altering the intended flavor profile.
  • Stick With Unsweetened: If you’re wondering, “can I use sweetened applesauce instead of unsweetened applesauce?” we strongly advise against it for this recipe. Unsweetened applesauce provides the necessary bulk and moisture from apples without introducing excessive sugar, which would throw off the balance of sweetness and could lead to overly moist or dense muffins. Sweetened varieties often have less apple solids and more added sugar.
  • Homemade Applesauce Considerations: If you prefer using homemade applesauce, ensure it’s smooth and not too watery or thin. Be aware that results may vary slightly compared to the consistent texture and moisture content of commercially produced applesauce.

Can I Use Apple Pie Spice Instead?

While we truly love and highly recommend the specific blend of cinnamon, nutmeg, and cloves detailed in our recipe card, you can certainly substitute apple pie spice for these individual spices if that’s what you have on hand. Just be aware that the overall flavor profile of your muffins will be slightly different from our intended blend.

Why Resting the Batter is Crucial for Gluten-Free Muffins

The 30-60 minute resting period isn’t just a suggestion; it’s a vital step for gluten-free baking! Gluten-free flours absorb liquids more slowly than wheat flour. Resting allows the flour to fully hydrate, preventing a gritty texture and ensuring your muffins are soft, moist, and rise beautifully. Don’t skip this step for truly fluffy results!

Delightful Serving Suggestions:

These gluten-free apple muffins are absolutely delicious on their own, a perfect self-contained treat. However, they can be made even more special with a few thoughtful additions. Try serving them with:

  • A dollop of soft butter or a decadent swirl of Whipped Cinnamon Honey Butter.
  • A generous spread of your favorite nut butter, such as creamy peanut butter or almond butter, for added protein and richness.
  • A spoonful of homemade Apple Butter or seasonal Pumpkin Butter to amplify the fall flavors.
  • A side of Greek yogurt and a drizzle of maple syrup for a more complete breakfast.
A close-up of a gluten-free apple muffin with a bite taken out, revealing its moist and fluffy interior.

Explore More Gluten-Free Muffins to Try

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Gluten-Free Almond Poppy Seed Muffins



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Two gluten-free apple muffins stacked on a white plate

Gluten-Free Applesauce Muffins

4.34 from 3 votes
Author:
Emily Dixon, Sweets & Thank You
Soft, fluffy gluten-free apple muffins made with applesauce, warm spices, and a yummy cinnamon-sugar topping you won’t want to miss!
Prep Time:

15 minutes

Cook Time:

18 minutes

Total Time:

33 minutes

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Rate

Servings:

12
muffins
Calories:

247
kcal

Ingredients

Dry Ingredients:

  • 1 ¾
    cup
    measure for measure gluten-free flour
    (210 grams)
  • 1
    teaspoon
    baking soda
  • ½
    teaspoon
    salt
  • 1 ¼
    teaspoons
    cinnamon
  • ½
    teaspoon
    ground nutmeg
  • ¼
    teaspoon
    ground cloves

Wet Ingredients:

  • ½
    cup
    oil
    (canola oil, vegetable oil; or avocado oil)
  • ½
    cup
    sugar
    (100 grams)
  • ¼
    cup
    light brown sugar
    (50 grams)
  • 1 ½
    cups
    unsweetened applesauce
  • 3
    large eggs
  • Optional: 1 cup grated apple or chopped nuts
    (like pecans or walnuts)

Optional Cinnamon-Sugar Topping*

  • 1
    Tablespoon
    melted butter
  • 2
    teaspoons
    ground cinnamon
  • ¼
    cup
    granulated sugar
    (50 grams)
  • 2
    Tablespoons
    gluten-free measure-for-measure flour
    (15 grams)

Instructions

  • Preheat & Prep. Start by preheating the oven to 400 degrees F. Line a 12-cup metal muffin pan with parchment liners or grease each muffin cup.
  • Combine The Dry Ingredients. In a medium bowl, combine gluten-free flour blend, baking soda, salt, cinnamon, nutmeg, and cloves. Whisk to combine well.
  • Mix Wet Ingredients. In a large bowl, combine sugar, brown sugar, and oil. Whisk to combine. Mix in applesauce, then mix in the eggs one at a time.
  • Finish The Batter. Add the dry ingredients to the wet ingredients and stir until just combined. If desired, fold in 1 cup grated apple or chopped nuts.
  • Let The Batter Rest. For best results, let the batter rest for 30-60 minutes. This will give your muffins a MUCH bigger rise and is worth the wait!
  • Mix Up Cinnamon-Sugar Mixture. In a small bowl, combine melted butter, cinnamon, sugar, and flour. Stir with a fork until everything is well combined and the butter is coating all the dry crumbs. It’ll be thick and powdery.
  • Scoop The Batter. After letting the batter rest, gently use an ice cream scoop to spoon about 1/4 cup of batter into each muffin cup, filling each muffin cup almost up to the top of the parchment liner. (Depending on how much the batter has expanded, you may end up having 1-2 muffins extra batter. You can bake these in a second batch.) Try to be gentle here so you don’t deflate the batter. Sprinkle tops the muffins with cinnamon sugar mixture.
  • Bake & Cool. Put the muffins in the oven and bake 5 minutes at 400 degrees. Reduce the temperature to 350 degrees and continue baking for 10-14 minutes, or until the muffins are done. The interior should reach at least 205 degrees F., the tops should spring back when gently pressed, and a toothpick inserted in the center should come out with just a few moist crumbs. Let the muffins cool 1-2 minutes in the pan, then transfer to a wire rack to cool completely.
  • Serve & Store. Enjoy warm muffins right away, or store leftover muffins in an airtight container at room temperature up to 2 days or in the freezer up to 2 months.

Notes

*Or Try It With Streusel!

  • In a small bowl, combine 3/4 cup (90 grams) gluten-free flour, 1/4 cup (50 grams) brown sugar, 1/4 cup (50 grams) sugar, 1 teaspoon cinnamon, and 5 Tablespoons melted butter. Stir with a fork until clumps and clusters form.
  • Sprinkle the crumb topping over the muffin batter in each muffin cup, generously covering them and gently patting the crumb topping down a bit into the batter.

Video

Course:
Breakfast, Muffins
Cuisine:
American
Diet:
Gluten Free
Keyword:
apple spice muffin recipe, applesauce muffins recipe, gluten free applesauce muffins

Serving:
1
muffin

|

Calories:
247
kcal

|

Carbohydrates:
35.3
g

|

Protein:
2.3
g

|

Fat:
11.3
g

|

Saturated Fat:
1.7
g

|

Cholesterol:
49
mg

|

Sodium:
230.9
mg

|

Potassium:
49.7
mg

|

Fiber:
2
g

|

Sugar:
19.4
g

|

Vitamin C:
0.3
mg

|

Calcium:
66.9
mg

Find the recipe:

sweetsandthankyou.com/gluten-free-applesauce-muffins/