Ultimate Gluten-Free Brown Butter Pistachio Chocolate Chunk Cookies: A Decadent Recipe
Prepare for an extraordinary cookie experience with these Gluten-Free Brown Butter Pistachio Chocolate Chunk Cookies. Each bite delivers a harmonious blend of rich, nutty caramel and toffee notes from the browned butter, complemented by the delightful crunch of pistachios and generous pools of melted dark chocolate. This isn’t just another cookie; it’s a carefully crafted, deeply flavorful masterpiece designed to impress even the most discerning palates, all while being completely gluten-free.

While a classic cookie always holds a special place, there’s an undeniable charm in a cookie that offers something truly exceptional – a little ‘extra’ in the best possible way. These gluten-free wonders elevate the humble cookie to a gourmet level, making them a perfect addition to any dessert spread, especially for holiday cookie plates or when you simply crave a luxurious treat.
The secret lies in a few clever techniques and a thoughtful combination of premium ingredients that result in a profoundly satisfying cookie. From the moment you take your first bite, you’ll be captivated by the layers of flavor: the complex, sweet-savory depth of brown butter, the luxurious melt of dark chocolate, the vibrant, earthy crunch of pistachios, and a subtle hint of salt that ties everything together. The texture is equally divine – golden brown edges give way to a soft, wonderfully chewy center, creating a textural paradise that defines cookie perfection.
What makes these cookies even more appealing is that this decadent experience begins with straightforward, accessible ingredients, transformed through simple yet impactful steps. Get ready to bake a batch of cookies that you’ll remember long after the last crumb is gone.

Simple Ingredients for an Exceptional Cookie
Creating these outstanding gluten-free pistachio cookies doesn’t require an exotic pantry. In fact, many of the core components are similar to our beloved Gluten-Free Brown Butter Chocolate Chip Cookies, with a few crucial additions that make them truly unique. Let’s delve into the magic behind each ingredient:
- Butter: The Golden Foundation. This recipe begins with a fundamental flavor enhancer: brown butter. By gently cooking butter until the milk solids caramelize, we unlock deep, complex notes of caramel, toffee, and toasted nuts that are simply unparalleled. You can opt for salted butter for an enhanced flavor profile, or unsalted if you prefer to precisely control the salt content. Both yield magnificent results in these pistachio cookies.
- Brown Sugar & Granulated Sugar: The Sweet Harmony. The perfect balance of chewiness and golden crispness in a cookie comes from using a combination of brown sugar and white granulated sugar. Brown sugar contributes moisture and a soft, chewy texture, along with its distinct molasses flavor, while granulated sugar ensures those beautiful golden edges and a slight crispness.
- Eggs + An Extra Egg Yolk: The Texture Secret. Using two whole eggs plus an additional egg yolk is a game-changer for these gluten-free cookies. The extra yolk adds richness and helps create an incredibly chewy, satisfying texture that perfectly complements the robust flavor of the brown butter. If you’re new to separating eggs, this helpful tutorial will guide you through the process effortlessly.
- Vanilla Extract: Aromatic Depth. A generous amount of high-quality vanilla extract is crucial. Its warm, aromatic notes beautifully intertwine with the caramel and toffee undertones of the brown butter and the luxurious depth of the dark chocolate, creating a rich, cohesive flavor profile.
- Gluten-Free Flour Blend: The Structural Core. For gluten-free baking, the choice of flour is paramount. We highly recommend a reliable measure-for-measure gluten-free flour blend, such as King Arthur Measure-For-Measure flour. It’s essential that your chosen blend contains xanthan gum, as this ingredient provides the necessary structure and elasticity that gluten typically offers, preventing crumbly cookies. For consistent results, always weigh your flour with a kitchen scale or utilize the scoop and level method to avoid over-packing.
- Cornstarch: The Tenderizer. Our “secret ingredient,” cornstarch, plays a subtle yet significant role. It helps to create a delicately crisp exterior while ensuring the interior of the cookie remains wonderfully light and tender, enhancing the overall melt-in-your-mouth experience.
- Baking Soda & Baking Powder: The Leavening Duo. These two leavening agents work in tandem to give the cookies their ideal puff and spread. Baking soda reacts with acidic ingredients (like brown sugar), promoting spread, while baking powder contributes to a softer, cake-like lift. Always ensure your baking soda and baking powder are fresh by performing these quick tests to guarantee optimal results.
- Dark Chocolate Chunks: Melty Puddles of Bliss. For the ultimate chocolate experience, we highly recommend using high-quality dark chocolate bars, roughly chopped into sizable chunks. While chocolate chips are convenient, chopping your own bars creates a delightful variety of shapes and sizes, leading to irresistible “puddles” of melted chocolate throughout the cookies. A 70-72% dark chocolate offers a perfect balance of sweetness and rich cocoa flavor (Lindt chocolate bars are an excellent choice!).
- Salted, Roasted Pistachios: The Crunchy Gem. Pistachios are the star nut in this recipe, offering a distinctive flavor and satisfying crunch. For convenience, pre-shelled, roasted, and salted pistachios (like Wonderful brand) are ideal. If you prefer less salt or want to roast them yourself, unsalted pistachios are also an option.
- Flaky Sea Salt: The Finishing Touch. While not strictly mandatory, a delicate sprinkle of flaky sea salt (such as Maldon salt) on top of the warm cookies elevates the flavors, adding a sophisticated touch that beautifully contrasts with the sweetness of the chocolate and the richness of the butter.

Crafting Your Perfect Cookies: A Step-by-Step Guide
For precise ingredient measurements, detailed instructions, and helpful tips, please refer to the comprehensive recipe card located below.
- Brown & Cool The Butter. Begin by melting your butter in a light-colored saucepan over medium heat. Whisk continuously as it melts and begins to foam. Pay close attention once it starts foaming, as the butter solids will quickly turn golden and then brown. You’ll know it’s ready when the butter beneath the foam is a rich golden color, similar to honey, and emits a wonderfully sweet, nutty aroma. Immediately remove the pan from the heat and transfer the browned butter (including all those precious brown bits at the bottom!) into the bowl of your stand mixer or a large mixing bowl. Allow it to cool for 10-15 minutes, or until it reaches room temperature and is no longer hot to the touch. This cooling step is crucial for the dough’s consistency.
- Combine Brown Butter & Sugar. Once your browned butter has cooled to room temperature, add both the granulated sugar and brown sugar to the bowl. Using the paddle attachment of your stand mixer, beat the mixture on medium speed for 2-3 minutes. Continue mixing until the sugars are thoroughly combined with the butter, and the mixture resembles wet sand in texture.
- Incorporate Eggs & Vanilla. Add the eggs one at a time, followed by the extra egg yolk, ensuring to blend thoroughly after each addition until fully incorporated. Next, pour in the vanilla extract and mix until just combined. Avoid overmixing at this stage to prevent developing too much gluten (even in gluten-free flour, vigorous mixing can affect texture).
- Add Dry Ingredients & Mix-ins. In a separate bowl, whisk together the gluten-free flour, cornstarch, salt, baking soda, and baking powder. Gradually add these dry ingredients to the wet mixture in the stand mixer. Mix on low speed for only a few seconds – the mixture will not be fully combined yet. Now, set aside a small handful of chocolate chunks and chopped pistachios for decorating the tops of your cookies later. Add the remaining chocolate chunks and chopped pistachios to the dough. Using a sturdy spatula, mix by hand until just combined. Be careful not to overmix, as this can lead to tough cookies.
- Scoop & Chill The Dough. Using a large cookie scoop (approximately 3 Tablespoon capacity), scoop uniform balls of cookie dough. Place these dough balls into an airtight container, cover tightly, and chill them in the refrigerator for a minimum of 2-3 hours, or ideally, up to 24 hours. This chilling step is absolutely essential; it allows the gluten-free flour to fully hydrate and prevents the cookies from spreading too much during baking, ensuring a perfectly chewy texture. Do not skip or rush this step for the best results!
- Preheat Oven & Prep Pans. When you’re ready to bake, remove the chilled cookie dough from the refrigerator. While the dough is coming to a slightly warmer temperature, preheat your oven to 350°F (175°C). Line two baking sheets with parchment paper; this allows you to alternate sheets between batches, ensuring even baking.
- Bake & Cool The Cookies. Roll 6 cookie dough balls between your palms to smooth them into neat spheres, then place them evenly spaced on a prepared baking sheet. Bake on the middle rack of your preheated oven for 10-12 minutes. The cookies are ready when their edges are beautifully golden brown, and the centers still appear slightly soft and underdone. Immediately after removing from the oven, gently press the reserved chocolate chunks and pistachios onto the tops of the warm cookies for an appealing, gourmet finish. If desired, sprinkle a little flaky sea salt over them. Allow the cookies to cool on the baking sheet for 2 minutes before carefully transferring them to a wire cooling rack to cool completely. Repeat this process with the remaining cookie dough.
- Serve & Store. Enjoy these delicious cookies once they’ve cooled down to your liking. Store any leftovers in an airtight container at room temperature for 2-3 days, or freeze them for up to 2 months for a delightful treat anytime.

Cookie Tips For Unrivaled Success
Achieving cookie perfection, especially in gluten-free baking, often comes down to a few key techniques. Here are some essential tips to help you master these pistachio chocolate chunk cookies and other baking endeavors:
- Essential Cookie Tools: Having the right equipment can make a world of difference. Explore our guide to 8 Cookie Tools We Use All The Time for recommendations that will streamline your baking process.
- Mastering Brown Butter: Brown butter is the heart of these cookies’ unique flavor. For a detailed walkthrough, including visual cues and common pitfalls to avoid, consult our comprehensive guide on How To Brown Butter.
- Separating Eggs Like a Pro: If the recipe calls for an extra egg yolk, don’t fret! Learn 3 Easy Ways To Separate Egg Yolks & Egg Whites to ensure you get just what you need without hassle.
- Room Temperature Ingredients: Ingredients at room temperature emulsify better, creating a smoother, more uniform dough. If you’re short on time, discover How To Get Eggs To Room Temperature FAST.
- Accurate Flour Measurement: In gluten-free baking, precise flour measurement is critical. Avoid scooping directly with your measuring cup, which can compact the flour. Instead, always use the Scoop & Level Method, or even better, weigh your flour with a digital kitchen scale for the most consistent results.
- Testing Leavening Agents: Old baking soda or baking powder can lead to flat, dense cookies. Ensure your leavening agents are still active by following These Quick Tests to check their freshness before you start baking.
- Freezing for Future Enjoyment: These cookies are perfect for making ahead! Learn How To Freeze Cookie Dough (and even bake from frozen) to always have a delicious treat on hand.

FAQ & Tricks For The Best Gluten-Free Pistachio Cookies
The Golden Rule: Don’t Skip The Chill Time! I know the anticipation of warm, fresh cookies can be overwhelming, but resisting the urge to bake immediately is paramount for this pistachio chocolate chunk cookie recipe. Chilling the dough allows the gluten-free flour to properly absorb the liquid, preventing excessive spreading during baking. This process also solidifies the butter, which helps the cookies hold their shape and develop a richer, more complex flavor. Skipping this crucial step will result in cookies that spread too thinly. The wait is truly worth it for the perfect texture and flavor, I promise!
Choosing Your Pistachios. For ultimate convenience, I love using pre-shelled, roasted, and salted pistachios. The added salt enhances the overall flavor profile of the cookie. However, if you’re sensitive to salt or prefer to control the sodium content, feel free to use roasted unsalted pistachios instead.
Enhancing Pistachio Flavor. To really amplify the vibrant, nutty essence of pistachios in these cookies, consider adding 1/4 to 1/2 teaspoon of almond extract along with the vanilla extract. Almond extract complements pistachio beautifully and adds another layer of sophisticated flavor.
Can I Use Other Nuts Instead of Pistachios? While these are specifically designed as pistachio chocolate chunk cookies, and their unique flavor profile is a key highlight, you can certainly experiment if pistachios aren’t your preference. Chopped pecans or walnuts make excellent substitutes, offering a different but equally delicious nutty crunch. Be aware that the flavor profile will change significantly, but they will still be wonderful cookies.
Craving Pistachio Pudding Cookies? If you’re looking for a different kind of pistachio treat, you can adapt our popular pudding chocolate chip cookie recipe. Simply swap in an instant pistachio pudding mix, then use chocolate chunks and chopped pistachios as your delicious mix-ins. This variation also offers a fun, vibrant green hue!
Happy baking! xo, Emily
More Gluten-Free Cookie Recipes To Try

Gluten-Free Brownie Cookies

Gluten-Free M&M Cookies

Gluten-Free Sprinkle Chocolate Chip Cookies
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Gluten-Free Pistachio Chocolate Chunk Cookies
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- Author: Emily Dixon, Sweets & Thank You
Total Time: 3 hours 15 minutes
Yield: 18 Cookies
Diet: Gluten Free
Description
These gluten-free pistachio cookies are layered with flavor! In every bite, you’ll get caramel notes from the brown butter, puddles of melty chocolate chunks, crunchy pistachios, and a touch of salt. They’re INCREDIBLE!
Ingredients
Wet Ingredients:
- 1 cup butter, cut into cubes (2 sticks, 226 grams)
- 3/4 cup brown sugar, lightly packed (150 grams)
- 3/4 cup granulated sugar (150 grams)
- 2 eggs + 1 egg yolk
- 1/2 Tablespoon vanilla extract
Dry Ingredients:
- 2 1/2 cups gluten-free measure-for-measure flour, weighed or scooped & leveled (300 grams)*
- 1 Tablespoon cornstarch (8 grams)
- 1 teaspoon salt
- 1 teaspoon baking soda
- 1/2 teaspoon baking powder
- 7 ounces dark chocolate bars, roughly chopped into large chunks (I use Lindt 70% bars)
- 1 cup salted, roasted pistachios, chopped (I buy pre-shelled!)
- flaky sea salt, to finish (optional)
Instructions
- Brown & Cool The Butter. Melt the butter in a light-colored saucepan over medium heat, whisking constantly until the butter begins to foam. (Watch carefully when the butter begins to foam, as it will turn golden and brown quickly.) When the butter under the foam is golden (like honey) and smells sweet with a nutty aroma, remove the pan from the heat and transfer to the bowl of your stand mixer or a mixing bowl to cool for 10-15 minutes, until it’s no longer hot to the touch. (Make sure to get all those lovely brown bits from the bottom of the pan!)
- Combine Brown Butter & Sugar. When the butter has cooled to room temperature, add the sugar and brown sugar. Mix with the paddle attachment on medium speed 2-3 minutes or until well combined and the mixture looks like wet sand.
- Add Eggs + Egg Yolk One At A Time. Add eggs + egg yolk one at a time, blending well after each addition.
- Mix In The Vanilla. Add the vanilla and mix to combine.
- Add Dry Ingredients. Add flour, cornstarch, baking soda, baking powder, and salt. Mix for a few seconds (it won’t be fully combined). Set aside a little of the chocolate and pistachios to top the cookies later, then add the remaining chocolate and pistachios to the cookie dough. Mix by hand with a spatula until just combined.
- Scoop & Chill The Dough. Use a large cookie scoop (3 Tablespoon size) to scoop cookie dough balls. Place in an airtight container, cover, and chill the cookie dough balls for at least 2-3 hours, up to 1 day in advance. (Do NOT rush this step, or your cookies will spread far too much)
- Preheat The Oven & Prep Your Pans. When you’re ready to bake, remove the dough from the refrigerator while the oven fully preheats to 350 degrees F. Line two baking sheets with parchment (so you can alternate sheets between batches.)
- Bake & Cool The Cookies. Roll 6 cookie dough balls in between your palms to smooth them out and place onto a prepared baking sheet. Bake at 350 degrees for 10-12 minutes, or until the edges are a golden brown color and the centers look just underdone. Garnish the tops of the cookies with a few extra pieces of chocolate and pistachios. Sprinkle with flaky salt, if desired. Cool the cookies on the baking sheet for 2 minutes before transferring to a wire rack to finish cooling. Repeat process with remaining cookie dough.
- Serve & Store. Enjoy right away once the cookies are cooled down, or store in an airtight container 2-3 days. (Or, freeze up to 2 months)
Notes
- Gluten-Free Flour. We highly recommend King Arthur Measure-For-Measure Gluten-Free Flour blend for these cookies. If you use another blend, make sure it contains xanthan gum! Don’t substitute almond flour, coconut flour, oat flour, etc. for these cookies, as they will not yield the correct texture.
- Measure Carefully! The secret to perfect cookies is measuring the flour correctly. Gram measurements will give you the best results every time, but if you can’t weigh the flour, use the spoon and level method. (DON’T use your measuring cup to scoop the flour directly from the bag!)
- Don’t Skip The Chill Time! I *know* it’s tempting to rush right through, but the chill time is ESSENTIAL to this pistachio chocolate chunk cookie recipe turning out properly. Chilling allows the flour to absorb liquid from the cookie dough, which helps control the spread of the cookie and enhances flavor development. If you skip the chill time, your cookies will spread FAR too much and may be greasy. It’s worth the wait for the best results, I promise!
- A Trick For Pretty Cookies. For perfectly round cookies with a professional finish, use a large round cookie cutter (slightly larger than your baked cookies) to gently scoot and shape the cookies into perfect circles immediately after they come out of the oven, while they are still warm and pliable. Then, top them with a few more chocolate pieces, pistachios, and a sprinkle of flaky sea salt for an extra touch of gourmet appeal!
- Make Them Smaller. This recipe makes 18 large cookies, approximately 3 Tablespoons each. If you prefer smaller cookies, use a medium cookie scoop (about 1.5-2 Tablespoons) and reduce the bake time by 1-2 minutes per batch, keeping an eye on the edges for golden brown doneness.
- Prep Time: 30 minutes
- Chill Time: 2 Hours
- Cook Time: 45 minutes
- Category: Dessert
- Method: Oven
- Cuisine: American
